Project Description

pyGEO is a python package capable of parsing microarray data files. It also has a primitive plotting function.

The project also contains a explorer which can be used as a standalone program to explore microarray data files (SOFT formatted files), plotting them and even better save the plots in a high quality format for publication.

Please see the Documentation page for getting started.

An Example:

EMT related gene expression after treatment with TGF-beta. see the example.py for more information on how to make these graphs.

Under Windows

pygeo-win-alpha3-emt.jpg

Under Linux(Ubuntu 12.04) :

pygeo-ubuntu-a3.png

Last edited Sep 12, 2012 at 11:23 PM by mahpour, version 22